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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113187347_113187829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113187347 - 113187829

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTTGTTTACA

Flanking Amino Acid:

ANNQILQGDTSGHPTFKCPL

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

57.3

0.22

2.3

78.67

37.8

Associated Gene:

Gene:

RNF138

Ensembl Gene ID:

ENSAPLG00000019822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028319

113184718 - 113190481

5764