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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113227248_113229989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113227248 - 113229989

Intron Length:

2742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AAATACTTAAAT

Flanking Amino Acid:

MELNTSTFYSATTPWFESYR

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

63.3

0.5

1.6

75.7

39.7

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067