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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113230080_113231304_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

113230080 - 113231304

Intron Length:

1225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AACATGAATTCAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ATGTCCTTAACA

Flanking Amino Acid:

DHEFLNHYVACMLVVSSSEP

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

0.52

1.1

77.7

35.3

Major PPT

57.8

0.18

1.1

52.3

45.3

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

86.1

1.13

85.98

32.9

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001