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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113233150_113234260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113233150 - 113234260

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTATA

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AATCTCTTAATA

Flanking Amino Acid:

ISDGLDNEIKDGLSNNFKTH

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

81.6

31.3

Major BPS

100

1.24

0.5

100

Major PPT

67.8

0.4

0.9

63.1

37.4

Minor 5ss

45.5

-0.5

2.5

60.1

44.4

Minor BPS

70.4

0.64

1.1

72.3

32.9

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001