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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113234509_113235990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113234509 - 113235990

Intron Length:

1482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CTAGCACTAATT

Flanking Amino Acid:

EKTIRQLNDQLISRKGLSRS

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.7

33.5

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

95.3

1.02

0.5

91.7

19.4

Minor 5ss

35.9

-1.6

2.6

42.5

44.2

Minor BPS

47.4

-0.1

66.6

44.1

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001