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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113238550_113240092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113238550 - 113240092

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CCCTTTTTAATA

Flanking Amino Acid:

AALLIRLTSEDSDLRSALLL

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.56

0.8

72.3

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

62.2

0.38

1.3

61.33

40.4

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001

ENSAPLT00000039154

113219604 - 113266604

47001