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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113244753_113245198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113244753 - 113245198

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

AATATCTGAGAA

Flanking Amino Acid:

SAKHDEAKEPGKCDDDMIGT

Intron Amino Acid Position:

791

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

0.97

0.6

91.8

19.1

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

45.1

-0.3

1.7

54.26

37.2

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001

ENSAPLT00000039154

113219604 - 113266604

47001