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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113251340_113252114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113251340 - 113252114

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AATCTTGCAATT

Flanking Amino Acid:

QKSVNISEDKDTKLASREKA

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

83.1

28.7

Major BPS

0.1

59.7

32.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

40.9

-1

2.7

53.5

43.9

Minor BPS

43.6

-0.4

60.58

37.4

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001