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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113252184_113252294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113252184 - 113252294

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATCC

Flanking Amino Acid:

FKAVRCKNSEENYTFADIVF

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.6

0.66

0.7

78.4

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

57.6

0.22

1.6

64.74

41.8

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008003

113219604 - 113266604

47001

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067