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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113252336_113253713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113252336 - 113253713

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCTTTCATC

Flanking Amino Acid:

FADIVFGNEQIISSASPCAD

Intron Amino Acid Position:

1177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.8

0.81

0.8

77.4

36.6

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

63.9

0.42

1.7

73.34

38.7

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001

ENSAPLT00000039154

113219604 - 113266604

47001