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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113253900_113254457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113253900 - 113254457

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCTCTGTATTT

Flanking Amino Acid:

VDLNVVVLWKAYVVEDNKQL

Intron Amino Acid Position:

1239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.3

29.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.63

0.9

73.2

36.9

Minor 5ss

38.2

-1.3

45.5

Minor BPS

47.4

-0.1

2.2

67.71

44.1

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001