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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113254560_113263355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113254560 - 113263355

Intron Length:

8796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTAC

5'SS Class:

major

3'SS Sequence:

GAATTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCATTCTGAATT

Flanking Amino Acid:

KEAFSFPQKQELPEMALLKF

Intron Amino Acid Position:

1301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.2

35.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.5

0.53

69.6

45.4

Minor 5ss

44.2

-0.6

2.8

58.9

45.9

Minor BPS

66.3

0.59

1.4

77.16

39.6

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039154

113219604 - 113266604

47001