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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113263502_113264287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113263502 - 113264287

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

ESFSHSFHQKSLCLVPVTLL

Intron Amino Acid Position:

1337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.6

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.7

0.89

0.7

84.7

30.1

Minor 5ss

28.4

-2.5

2.9

41.8

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

TRAPPC8

Ensembl Gene ID:

ENSAPLG00000007624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028842

113219604 - 113266670

47067

ENSAPLT00000008003

113219604 - 113266604

47001

ENSAPLT00000039154

113219604 - 113266604

47001