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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113640135_113642411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113640135 - 113642411

Intron Length:

2277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTTCCTAACT

Flanking Amino Acid:

AVPSLVLGLLVLSLCCDACK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

76.9

0.67

66.3

40.4

Major PPT

81.6

0.71

0.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

78.6

0.97

1.6

96.51

28.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043511

113640003 - 113661942

21940

ENSAPLT00000006084

113640003 - 113661942

21940