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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113659021_113660290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113659021 - 113660290

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTACTTTATTT

Flanking Amino Acid:

NTEAPGEEVMDHNIIPLQNT

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.8

0.89

0.7

89.4

26.6

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

67.5

0.63

1.6

84.37

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043511

113640003 - 113661942

21940

ENSAPLT00000006084

113640003 - 113661942

21940