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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114272220_114298172_F

Intron Information:

Intron Rank:

140852

Intron Class:

major

Intron Phase:

Intron Coordinates:

114272220 - 114298172

Intron Length:

25953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATATATATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

72.2

39.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

27.6

-2.6

3.4

40.1

Minor BPS

45.6

-0.2

1.9

65.18

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047289

114270223 - 114298408

28186