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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114475370_114494771_R

Intron Information:

Intron Rank:

138198

Intron Class:

major

Intron Phase:

Intron Coordinates:

114475370 - 114494771

Intron Length:

19402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.2

81.5

32.7

Major BPS

63.9

0.35

63.9

30.3

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.7

-2.1

3.1

40.9

45.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039635

114472419 - 114494876

22458