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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114559970_114575221_F

Intron Information:

Intron Rank:

125358

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

114559970 - 114575221

Intron Length:

15252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

GCTCTCTGGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTATAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

81.7

31.1

Major BPS

100

1.24

0.5

100

Major PPT

52.8

0.06

1.2

54.9

39.4

Minor 5ss

38.8

-1.3

57.3

41.2

Minor BPS

55.9

0.18

1.7

68.75

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038253

114559658 - 114579004

19347