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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114687998_114693800_R

Intron Information:

Intron Rank:

145743

Intron Class:

major

Intron Phase:

Intron Coordinates:

114687998 - 114693800

Intron Length:

5803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAAAT

U12 Branch Point Sequence:

TGTCTTCTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

47.8

-0.1

1.3

41.4

Major PPT

74.1

0.54

75.1

33.8

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

47.3

-0.3

1.8

55.38

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029947

114685956 - 114699895

13940