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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114873428_114875138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114873428 - 114875138

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

ATAATTTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTGATAATT

Flanking Amino Acid:

LDREQIASFHLRAHAVDVNG

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

31.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.6

0.67

0.9

73.7

40.8

Minor 5ss

38.8

-1.3

3.7

60.9

43.8

Minor BPS

49.4

0.04

2.2

77.83

38.8

Associated Gene:

Gene:

CDH2

Ensembl Gene ID:

ENSAPLG00000004203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004419

114791190 - 114908796

117607