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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114881452_114881815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114881452 - 114881815

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

CTTTTGCCAACA

Flanking Amino Acid:

DNPPEFTAMTFYGEVPENRV

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

94.9

1.01

0.5

91.6

19.6

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

44.3

-0.4

2.4

63.62

42.9

Associated Gene:

Gene:

CDH2

Ensembl Gene ID:

ENSAPLG00000004203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004419

114791190 - 114908796

117607