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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114882002_114884248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114882002 - 114884248

Intron Length:

2247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CACTCTTTACTT

Flanking Amino Acid:

SNDGLVTVVKPIDFEKNRMF

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

0.6

65.6

41.1

Major PPT

0.76

0.8

79.6

32.2

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

0.3

1.6

68.01

43.8

Associated Gene:

Gene:

CDH2

Ensembl Gene ID:

ENSAPLG00000004203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004419

114791190 - 114908796

117607