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Intron Name: Anas_platyrhynchos_platyrhynchos_2_114884506_114885973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114884506 - 114885973

Intron Length:

1468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTATATA

5'SS Class:

major

3'SS Sequence:

TTCAAATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTGTGTTCAAAT

Flanking Amino Acid:

PDRYMQQTSLRYSKLSDPAN

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

37.8

Major BPS

77.3

0.68

81.5

Major PPT

63.9

0.31

57.3

Minor 5ss

40.2

-1.1

2.7

51.4

45.1

Minor BPS

49.7

0.05

2.1

73.16

43.8

Associated Gene:

Gene:

CDH2

Ensembl Gene ID:

ENSAPLG00000004203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004419

114791190 - 114908796

117607