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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115069789_115071705_F

Intron Information:

Intron Rank:

140149

Intron Class:

major

Intron Phase:

Intron Coordinates:

115069789 - 115071705

Intron Length:

1917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

AGTGTAGCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

75.7

0.58

0.8

69.8

29.9

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

34.9

-1

2.3

51.8

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028204

115068175 - 115071885

3711