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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115262612_115264756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115262612 - 115264756

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAACTCTT

5'SS Class:

major

3'SS Sequence:

CCTCTCTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TAGAGCTTAATG

Flanking Amino Acid:

VIMGKWENQWVYWVGPIIGA

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

72.7

44.5

Major BPS

69.2

0.48

1.3

71.9

Major PPT

76.4

0.59

0.7

71.6

26.6

Minor 5ss

45.3

-0.5

2.9

59.5

44.9

Minor BPS

52.6

-0

1.9

57.12

44.6

Associated Gene:

Gene:

AQP4

Ensembl Gene ID:

ENSAPLG00000004032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034431

115260542 - 115265035

4494

ENSAPLT00000004140

115260597 - 115265035

4439