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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115392001_115418038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

115392001 - 115418038

Intron Length:

26038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AGATCATTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.7

0.71

0.8

76.1

32.1

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

67.4

0.52

1.6

72.43

37.6

Associated Gene:

Gene:

KCTD1

Ensembl Gene ID:

ENSAPLG00000003981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020177

115391203 - 115455805

64603