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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115412520_115418038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115412520 - 115418038

Intron Length:

5519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AGATCATTAACC

Flanking Amino Acid:

HLLRELPPVRDSRPNMSRPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.8

43.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.7

0.71

0.8

76.1

32.1

Minor 5ss

32.4

-2

3.6

38.1

46.8

Minor BPS

67.4

0.52

1.6

72.43

37.6

Associated Gene:

Gene:

KCTD1

Ensembl Gene ID:

ENSAPLG00000003981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034716

115411505 - 115452258

40754