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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115496193_115507553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115496193 - 115507553

Intron Length:

11361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTAAACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTAAACT

Flanking Amino Acid:

HLRLKQKAKEMQQLELAQMQ

Intron Amino Acid Position:

938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.3

0.44

64.6

40.4

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

67.3

0.62

1.6

82.56

39.6

Associated Gene:

Gene:

TAF4B

Ensembl Gene ID:

ENSAPLG00000003724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037627

115483663 - 115553709

70047

ENSAPLT00000003829

115483663 - 115553709

70047