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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115508764_115514364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115508764 - 115514364

Intron Length:

5601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTGTCTATAACA

Flanking Amino Acid:

IAQHRVSTHKGSDKYIVSSD

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

85.8

0.81

0.8

77.5

36.2

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

70.5

0.64

1.6

80.15

35.8

Associated Gene:

Gene:

TAF4B

Ensembl Gene ID:

ENSAPLG00000003724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037627

115483663 - 115553709

70047

ENSAPLT00000020631

115483663 - 115553709

70047

ENSAPLT00000003829

115483663 - 115553709

70047