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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115523090_115527823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115523090 - 115527823

Intron Length:

4734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

ATTCCACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCACTCTTGATA

Flanking Amino Acid:

AQQVVKVKQLVVQQPSGAIV

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

77.9

0.63

0.9

70.7

34.3

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

60.4

0.32

1.2

63.67

36.7

Associated Gene:

Gene:

TAF4B

Ensembl Gene ID:

ENSAPLG00000003724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037627

115483663 - 115553709

70047

ENSAPLT00000020631

115483663 - 115553709

70047

ENSAPLT00000003829

115483663 - 115553709

70047