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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115531131_115533225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115531131 - 115533225

Intron Length:

2095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TCAGTTATAAAT

Flanking Amino Acid:

NVKNLVQNLLEAKIEPEEFT

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

78.6

0.71

78.6

Major PPT

79.9

0.67

0.7

78.5

29.6

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

46.7

-0.1

1.7

62.06

42.1

Associated Gene:

Gene:

TAF4B

Ensembl Gene ID:

ENSAPLG00000003724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037627

115483663 - 115553709

70047

ENSAPLT00000020631

115483663 - 115553709

70047

ENSAPLT00000003829

115483663 - 115553709

70047