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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115538684_115552835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115538684 - 115552835

Intron Length:

14152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTCTCCAACA

Flanking Amino Acid:

QLPASLQLPPGTVLIRSSSG

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

72.2

39.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

81.9

0.72

0.8

78.3

29.1

Minor 5ss

29.1

-2.4

2.8

35.6

Minor BPS

0.4

1.9

80.53

Associated Gene:

Gene:

TAF4B

Ensembl Gene ID:

ENSAPLG00000003724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003829

115483663 - 115553709

70047

ENSAPLT00000037627

115483663 - 115553709

70047

ENSAPLT00000020631

115483663 - 115553709

70047