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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115580532_115581707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115580532 - 115581707

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGATAC

5'SS Class:

major

3'SS Sequence:

TTCTCTTGGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTGACTTAATGT

Flanking Amino Acid:

QNKGKTSECSQYQQMLHTNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

66.2

34.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

69.6

0.44

Minor 5ss

40.4

-1.1

3.1

56.4

42.1

Minor BPS

41.4

-0.5

2.1

55.4

47.1

Associated Gene:

Gene:

SS18

Ensembl Gene ID:

ENSAPLG00000003628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020434

115579659 - 115616585

36927

ENSAPLT00000003726

115579804 - 115701478

121675

ENSAPLT00000042237

115579804 - 115701478

121675