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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115608865_115610709_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

115608865 - 115610709

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCTCT

5'SS Class:

major

3'SS Sequence:

CGAATTGATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TCTTGTCGAATT

Flanking Amino Acid:

EGMNQQYYPDGHNDYGYQQP

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.9

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

57.2

0.16

1.1

50.9

42.7

Minor 5ss

46.7

-0.3

2.8

63.1

43.4

Minor BPS

46.3

-0.2

2.1

68.92

42.6

Associated Gene:

Gene:

SS18

Ensembl Gene ID:

ENSAPLG00000003628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020434

115579659 - 115616585

36927

ENSAPLT00000003726

115579804 - 115701478

121675