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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115608865_115611520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115608865 - 115611520

Intron Length:

2656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCTCT

5'SS Class:

major

3'SS Sequence:

AATCATCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

TTTCTTGCAATC

Flanking Amino Acid:

EGMNQQYYPDGNSQYGQQQD

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.9

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

74.1

0.54

0.9

65.8

39.8

Minor 5ss

46.7

-0.3

2.8

63.1

43.4

Minor BPS

46.2

-0.3

2.1

63.08

37.1

Associated Gene:

Gene:

SS18

Ensembl Gene ID:

ENSAPLG00000003628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042237

115579804 - 115701478

121675