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Intron Name: Anas_platyrhynchos_platyrhynchos_2_115611644_115614139_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115611644 - 115614139

Intron Length:

2496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TAACATTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCCATGTTAACA

Flanking Amino Acid:

QGYPGQQQGYGPSQSGPGPQ

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

100

1.24

0.5

100

Major PPT

72.3

0.5

62.5

43.5

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

50.5

0.01

2.1

62.91

43.8

Associated Gene:

Gene:

SS18

Ensembl Gene ID:

ENSAPLG00000003628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042237

115579804 - 115701478

121675

ENSAPLT00000020434

115579659 - 115616585

36927

ENSAPLT00000003726

115579804 - 115701478

121675