Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_115885709_115891263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115885709 - 115891263

Intron Length:

5555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

GATTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATGGTCTTGATT

Flanking Amino Acid:

AGVGHTAAQTDPNCKLEDKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.9

45.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

84.5

0.78

0.8

81.5

35.8

Minor 5ss

34.6

-1.8

3.4

44.5

44.4

Minor BPS

60.6

0.42

1.4

71.97

39.8

Associated Gene:

Gene:

ZNF521

Ensembl Gene ID:

ENSAPLG00000003518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018912

115884494 - 116098276

213783