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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116177057_116179568_R

Intron Information:

Intron Rank:

141715

Intron Class:

major

Intron Phase:

Intron Coordinates:

116177057 - 116179568

Intron Length:

2512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

CTCATTATGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTACCCTTGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

69.1

0.43

64.8

40.1

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

67.2

0.54

1.4

74.4

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029724

116176853 - 116183583

6731