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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116230060_116250071_R

Intron Information:

Intron Rank:

138556

Intron Class:

major

Intron Phase:

Intron Coordinates:

116230060 - 116250071

Intron Length:

20012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TATATCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTGTTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.4

0.68

0.9

74.1

36.1

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

55.1

0.24

2.1

80.79

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041396

116229961 - 116250596

20636