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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116304386_116306924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116304386 - 116306924

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTCCTTTATTT

Flanking Amino Acid:

LNLAISDFAVGVFCIPLYIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

89.4

0.89

0.7

84.4

30.5

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

68.7

0.66

1.5

85.14

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039060

116299298 - 116307174

7877