Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_116350840_116357151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116350840 - 116357151

Intron Length:

6312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTACCTGACTC

Flanking Amino Acid:

GEIIFDINCKGRSKSNMGWT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

77.3

37.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

79.8

0.67

0.8

77.9

36.6

Minor 5ss

32.4

-2

2.5

39.5

Minor BPS

57.5

0.22

1.8

72.09

39.1

Associated Gene:

Gene:

OSBPL1A

Ensembl Gene ID:

ENSAPLG00000015641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048420

116346377 - 116427427

81051

ENSAPLT00000023113

116346377 - 116427427

81051

ENSAPLT00000016378

116346377 - 116427427

81051