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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116360609_116361715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116360609 - 116361715

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTCTAACA

Flanking Amino Acid:

HDKDIRNMLEAVERTQERKL

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

84.1

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.78

0.8

81.5

Minor 5ss

49.3

-0

2.5

67.2

43.9

Minor BPS

76.4

0.83

1.6

88.12

28.9

Associated Gene:

Gene:

OSBPL1A

Ensembl Gene ID:

ENSAPLG00000015641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048420

116346377 - 116427427

81051

ENSAPLT00000023113

116346377 - 116427427

81051

ENSAPLT00000016378

116346377 - 116427427

81051