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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116427073_116430227_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

116427073 - 116430227

Intron Length:

3155

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTGACCAG

5'SS Class:

major

3'SS Sequence:

AGGACAGGTCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

AAGACTATCACA

Flanking Amino Acid:

PLDMVMSAKQVILQSSCEQS

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.3

41.3

45.1

Major BPS

65.8

0.39

57.3

39.4

Major PPT

49.3

-0

1.1

36.1

44.5

Minor 5ss

21.2

-3.3

3.8

29.3

43.4

Minor BPS

43.9

-0.4

1.9

52.57

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033245

116426951 - 116438568

11618