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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116435696_116435776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116435696 - 116435776

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTCC

5'SS Class:

major

3'SS Sequence:

CTTCTATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TACAGTTTAATT

Flanking Amino Acid:

YFQDFIAFHRDNLNLNLEEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

69.6

35.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

87.1

0.83

0.7

84.7

28.8

Minor 5ss

43.9

-0.7

2.3

54.4

42.7

Minor BPS

54.2

0.21

1.8

69.24

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033245

116426951 - 116438568

11618