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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116639369_116642178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116639369 - 116642178

Intron Length:

2810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

CTGTCCTTAAAA

Flanking Amino Acid:

VTRIILAAFRNLLEKSTERE

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

83.8

0.76

0.8

76.9

37.3

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

74.2

0.76

1.4

76.54

40.6

Associated Gene:

Gene:

ATP6V1H

Ensembl Gene ID:

ENSAPLG00000003861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034960

116591251 - 116658527

67277

ENSAPLT00000027216

116591251 - 116659815

68565

ENSAPLT00000024714

116577968 - 116659815

81848

ENSAPLT00000004004

116631278 - 116659815

28538

ENSAPLT00000045993

116622429 - 116659815

37387