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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116642372_116644611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116642372 - 116644611

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTAATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTCTGTTAATT

Flanking Amino Acid:

FAWVEADGVNCIMGVLSNKC

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.6

34.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

80.9

0.7

0.9

77.2

41.4

Minor 5ss

44.5

-0.6

3.1

61.3

44.6

Minor BPS

63.4

0.5

84.73

36.1

Associated Gene:

Gene:

ATP6V1H

Ensembl Gene ID:

ENSAPLG00000003861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024714

116577968 - 116659815

81848

ENSAPLT00000004004

116631278 - 116659815

28538

ENSAPLT00000045993

116622429 - 116659815

37387

ENSAPLT00000034960

116591251 - 116658527

67277

ENSAPLT00000027216

116591251 - 116659815

68565