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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116644710_116647421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116644710 - 116647421

Intron Length:

2712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

CTTCTTGTAAGA

Flanking Amino Acid:

VEAGAVSTSDSSQYVQCVAG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

77.3

0.61

0.8

70.1

35.5

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

45.3

-0.3

2.2

59.25

41.4

Associated Gene:

Gene:

ATP6V1H

Ensembl Gene ID:

ENSAPLG00000003861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027216

116591251 - 116659815

68565

ENSAPLT00000024714

116577968 - 116659815

81848

ENSAPLT00000004004

116631278 - 116659815

28538

ENSAPLT00000045993

116622429 - 116659815

37387

ENSAPLT00000034960

116591251 - 116658527

67277