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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116648456_116649911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116648456 - 116649911

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CATTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATCTGTTAATT

Flanking Amino Acid:

NRQDLFTVHMAARIIAKLAA

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

84.4

0.85

34.5

Major PPT

84.1

0.77

0.8

81.1

30.5

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

53.9

0.2

72.6

38.4

Associated Gene:

Gene:

ATP6V1H

Ensembl Gene ID:

ENSAPLG00000003861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004004

116631278 - 116659815

28538

ENSAPLT00000045993

116622429 - 116659815

37387

ENSAPLT00000034960

116591251 - 116658527

67277

ENSAPLT00000027216

116591251 - 116659815

68565

ENSAPLT00000024714

116577968 - 116659815

81848