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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116722680_116723575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116722680 - 116723575

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTGCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CCTTTGCTAAAG

Flanking Amino Acid:

CKKKNCTYTQVQTRSADEPM

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

71.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

63.1

0.3

1.1

62.5

37.8

Minor 5ss

-2.1

3.3

43.8

Minor BPS

41.7

-0.7

2.3

48.24

45.3

Associated Gene:

Gene:

TCEA1

Ensembl Gene ID:

ENSAPLG00000004621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004768

116721513 - 116749482

27970