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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116726700_116727200_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

116726700 - 116727200

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

AAG|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AAATCCAAAGCAC|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTTCCTTAAAT

Flanking Amino Acid:

EEELGSQIEEAIFQEFKNTD

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

38.4

-0.7

3.5

62.3

44.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

33.4

-0.9

3.1

38.8

37.9

Minor 5ss

100

1.66

0.5

100

Minor BPS

84.7

1.17

1.2

94.63

31.7

Associated Gene:

Gene:

TCEA1

Ensembl Gene ID:

ENSAPLG00000004621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004768

116721513 - 116749482

27970